Updating annotations with the distributed annotation system and the automated sequence annotation pipeline

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Updating annotations with the distributed annotation system and the automated sequence annotation pipeline

SUMMARY The integration between BioDAS ProServer and Automated Sequence Annotation Pipeline (ASAP) provides an interface for querying diverse annotation sources, chaining and linking results, and standardizing the output using the Distributed Annotation System (DAS) protocol. This interface allows pipeline plans in ASAP to be integrated into any system using HTTP and also allows the information...

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The automated sequence annotation pipeline (ASAP) is designed to ease routine investigation of new functional annotations on unknown sequences, such as expressed sequence tags (ESTs), through querying of web-accessible resources and maintenance of a local database. The system allows easy use of the output from one search as the input for a new search, as well as the filtering of results. The da...

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ژورنال

عنوان ژورنال: Bioinformatics

سال: 2012

ISSN: 1460-2059,1367-4803

DOI: 10.1093/bioinformatics/bts530