Using lumi, a package processing Illumina Microarray

نویسندگان

  • Pan Du
  • Gang Feng
  • Warren A. Kibbe
  • Simon Lin
چکیده

5 Data preprocessing 3 5.1 Intelligently read the BeadStudio output file . . . . . . . . . . . . 5 5.2 Quality control of the raw data . . . . . . . . . . . . . . . . . . . 8 5.3 Background correction . . . . . . . . . . . . . . . . . . . . . . . . 18 5.4 Variance stabilizing transform . . . . . . . . . . . . . . . . . . . . 19 5.5 Data normalization . . . . . . . . . . . . . . . . . . . . . . . . . . 19 5.6 Quality control after normalization . . . . . . . . . . . . . . . . . 23 5.7 Encapsulate the processing steps . . . . . . . . . . . . . . . . . . 23 5.8 Inverse VST transform to the raw scale . . . . . . . . . . . . . . 30

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تاریخ انتشار 2007