December 22, 2016 Type Package Title Identification of mutational clusters in protein quaternary structures. Version 1.6.0 Date 2014-09-25 Author Gregory Ryslik, Yuwei Cheng, Hongyu Zhao Maintainer Gregory Ryslik Description Identifies clustering of somatic mutations in proteins over the entire quaternary structure. License GPL-2 biocViews Clustering, Proteomics, Somat...

November 21, 2016 Type Package Title Toolkit for Compound-Protein Interaction in Drug Discovery Version 1.10.3 Date 2016-11-18 Description Rcpi offers a molecular informatics toolkit with a comprehensive integration of bioinformatics and chemoinformatics tools for drug discovery. Author Nan Xiao , Dongsheng Cao, Qingsong Xu Maintainer Nan Xiao License ...

February 1, 2017 Version 3.0.0 Date 2016-09-16 Title Rank Product method for identifying differentially expressed genes with application in meta-analysis Author Francesco Del Carratore , Andris Janckevics Fangxin Hong , Ben Wittner , Rainer Breitling <r.breitling...

Introduction: Incontinentia pigmenti (IP) is a rarely diagnosed x-linked dominant disease affecting tissues of ectodermal and mesodermal origin such as cutaneous tissues, teeth, eyes, hair, the central nervous system. Dermatologic manifestations are often first signs observed in patients with IP present nearly all subjects, but they less harmful do not require treatment. Oral might affect both ...

In this research, we present a comprehensive, longitudinal empirical summary of the R package ecosystem, including not just CRAN, but also Bioconductor and GitHub. We analyze more than 25,000 packages, 150,000 releases, 15 million files across two decades, providing comprehensive counts trends for common metrics authors, licenses, other important metadata. find that historical growth ecosystem ...

RNA editing of mitochondrial gene transcripts plays a central role during plant development and evolutionary adaptation. RNA editing has previously been reported to differ between the rice cytoplasmic male sterile (CMS) line and its maintainer line, which has been suggested as a cause for their different performances under environmental stress. To specifically test this hypothesis, a wild abort...

Cytoplasmic male sterility (CMS) in pepper (Capsicum annuum L.) has been associated with novel genes in the mitochondria, such as orf507 and Ψatp6-2. Plant sterility has been proved to result from the rearrangement of the mitochondrial genome. Previous studies have demonstrated that orf507 is co-transcribed with the cox II gene, and Ψatp6-2 is truncated at the 3' region of the atp6-2 that is fo...

March 29, 2017 Version 3.0.0 Date 2016-09-16 Title Rank Product method for identifying differentially expressed genes with application in meta-analysis Author Francesco Del Carratore , Andris Janckevics Fangxin Hong , Ben Wittner , Rainer Breitling <r.breitling@b...

February 19, 2015 Version 1.8.15 Date 2014/12/17 Title Analysis of habitat selection by animals Author Clement Calenge, contributions from Mathieu Basille, Stephane Dray and Scott Fortmann-Roe Maintainer Clement Calenge Depends R (>= 2.10.0), ade4, tkrplot, shapefiles, sp Suggests spatstat, MASS, CircStats Description A collection of tools for the analysis of hab...