Genomic selection (GS) using high-density single-nucleotide polymorphisms (SNPs) is promising to improve response to selection in populations that are under artificial selection. High-density SNP genotyping of all selection candidates each generation, however, may not be cost effective. Smaller panels with SNPs that show strong associations with phenotype can be used, but this may require separ...

In order to have successful application of genomic selection, reference population and marker density should be chosen properly. This study purpose was to investigate the accuracy of genomic estimated breeding values in terms of low (5K), intermediate (50K) and high (777K) densities in the simulated populations, when different scenarios were applied about the reference populations selecting. Af...

The objective of this study was to evaluate the imputation accuracy of parent-offspring trios under different scenarios. By using simulated datasets, the performance Bayesian LASSO in genomic prediction was also examined. The genome consisted of 5 chromosomes and each chromosome was set as 1 Morgan length. The number of SNPs per chromosome was 10000. One hundred QTLs were randomly distributed a...

We present predictions for the 21 cm brightness temperature power spectrum during the Epoch of Reionization (EoR). We discuss the implications of the “light cone” effect, which incorporates evolution of the neutral hydrogen fraction and 21 cm brightness temperature along the line of sight. Using a novel method calibrated against radiation-hydrodynamic simulations, we model the neutral hydrogen ...

We present the first measurements of the weak gravitational lensing signal induced by the large scale mass distribution from data obtained as part of the ongoing Canada-France-Hawaii Telescope Legacy Survey (CFHTLS). The data used in this analysis are from the Wide Synoptic Survey, which aims to image ∼ 170 square degree in five filters. We have analysed ∼ 22 deg (31 pointings) of i data spread...

Context. One science goal of the upcoming Planck mission is to perform a full-sky cluster survey based on the Sunyaev-Zel’dovich (SZ) effect, which leads to the question of how such a survey would be affected by cosmological models with a different history of structure formation than ΛCDM. One class of these models are early dark energy (EDE) cosmologies, where the dark energy contribution does...

With the availability of high-density marker maps and cost-effective genotyping, genomic selection methods may provide faster genetic gain than can be achieved by current selection methods based on phenotypes and the pedigree. Here we investigate some of the factors driving the accuracy of genomic selection, namely marker density and marker type (i.e., microsatellite and SNP markers), and the u...