نتایج جستجو برای: ubiquitin

تعداد نتایج: 28509  

Journal: :The Journal of biological chemistry 1985
C M Pickart I A Rose

Ubiquitin carboxyl-terminal hydrolase (formerly known as ubiquitin carboxyl-terminal esterase), from rabbit reticulocytes, has been shown to hydrolyze thiol esters formed between the ubiquitin carboxyl terminus and small thiols (e.g. glutathione), as well as free ubiquitin adenylate (Rose, I. A., and Warms, J. V. B. (1983) Biochemistry 22, 4234-4237). We now show that this enzyme hydrolyzes ami...

Journal: :Science 2013
Andreas Ernst George Avvakumov Jiefei Tong Yihui Fan Yanling Zhao Philipp Alberts Avinash Persaud John R Walker Ana-Mirela Neculai Dante Neculai Andrew Vorobyov Pankaj Garg Linda Beatty Pak-Kei Chan Yu-Chi Juang Marie-Claude Landry Christina Yeh Elton Zeqiraj Konstantina Karamboulas Abdellah Allali-Hassani Masoud Vedadi Mike Tyers Jason Moffat Frank Sicheri Laurence Pelletier Daniel Durocher Brian Raught Daniela Rotin Jianhua Yang Michael F Moran Sirano Dhe-Paganon Sachdev S Sidhu

The ubiquitin system regulates virtually all aspects of cellular function. We report a method to target the myriad enzymes that govern ubiquitination of protein substrates. We used massively diverse combinatorial libraries of ubiquitin variants to develop inhibitors of four deubiquitinases (DUBs) and analyzed the DUB-inhibitor complexes with crystallography. We extended the selection strategy t...

Journal: :The arabidopsis book 2014
Judy Callis

The protein ubiquitin is a covalent modifier of proteins, including itself. The ubiquitin system encompasses the enzymes required for catalysing attachment of ubiquitin to substrates as well as proteins that bind to ubiquitinated proteins leading them to their final fate. Also included are activities that remove ubiquitin independent of, or in concert with, proteolysis of the substrate, either ...

2017
Chao Liu Weixiao Liu Yihong Ye Wei Li

Ubiquitination of a subset of proteins by ubiquitin chain elongation factors (E4), represented by Ufd2p in Saccharomyces cerevisiae, is a pivotal regulator for many biological processes. However, the mechanism of Ufd2p-mediated ubiquitination is largely unclear. Here, we show that Ufd2p catalyses K48-linked multi-monoubiquitination on K29-linked ubiquitin chains assembled by the ubiquitin ligas...

Journal: :Current Issues in Molecular Biology 2020

2015
Jun-Bao Fan Kei-lchiro Arimoto Khatereh Motamedchaboki Ming Yan Dieter A. Wolf Dong-Er Zhang

As a ubiquitin-like modifier, ISG15 is conjugated to many cellular proteins in a process termed protein ISGylation. However, the crosstalk between protein ISGylation and the ubiquitin proteasome system is not fully understood. Here, we report that cellular ubiquitin is a substrate of ISG15 and Lys 29 on ubiquitin is the major ISG15 acceptor site. Using a model substrate, we demonstrate that ISG...

Journal: :Cell 2007
John Hanna Alice Meides Dan Phoebe Zhang Daniel Finley

Ubiquitin-dependent protein degradation is essential for cells to survive many environmental stresses. Thus, it may be necessary to buffer ubiquitin and proteasome pools against fluctuation. Proteasome levels are tightly regulated, and proteasome deficiency stimulates a stress response. Here we report a novel pathway of cellular response to ubiquitin depletion. Unlike proteasome stress, ubiquit...

2011
Inbal Ziv Yulia Matiuhin Donald S. Kirkpatrick Zoi Erpapazoglou Sebastien Leon Marina Pantazopoulou Woong Kim Steven P. Gygi Rosine Haguenauer-Tsapis Noa Reis Michael H. Glickman Oded Kleifeld

Any of seven lysine residues on ubiquitin can serve as the base for chain-extension, resulting in a sizeable spectrum of ubiquitin modifications differing in chain length or linkage type. By optimizing a procedure for rapid lysis, we charted the profile of conjugated cellular ubiquitin directly from whole cell extract. Roughly half of conjugated ubiquitin (even at high molecular weights) was no...

2017
Sora Lee Jessica M Tumolo Aaron C Ehlinger Kristin K Jernigan Susan J Qualls-Histed Pi-Chiang Hsu W Hayes McDonald Walter J Chazin Jason A MacGurn

Despite its central role in protein degradation little is known about the molecular mechanisms that sense, maintain, and regulate steady state concentration of ubiquitin in the cell. Here, we describe a novel mechanism for regulation of ubiquitin homeostasis that is mediated by phosphorylation of ubiquitin at the Ser57 position. We find that loss of Ppz phosphatase activity leads to defects in ...

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