نتایج جستجو برای: genomics databases

تعداد نتایج: 136878  

2003
Amit Gur Yaniv Semel Avigdor Cahaner

Functional genomics is as powerful as the diversity of phenotypes that are associated with the databases of DNA sequences and their expression patterns. A special bioinformatics challenge is to include detailed information in genomic databases about subtle phenoptypic differences that show continuous distribution in segregating populations. The objective of Real Time QTL (RTQ) is to present in ...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2005
Richard A George Ruth V Spriggs Gail J Bartlett Alex Gutteridge Malcolm W MacArthur Craig T Porter Bissan Al-Lazikani Janet M Thornton Mark B Swindells

Because of the extreme impact of genome sequencing projects, protein sequences without accompanying experimental data now dominate public databases. Homology searches, by providing an opportunity to transfer functional information between related proteins, have become the de facto way to address this. Although a single, well annotated, close relationship will often facilitate sufficient annotat...

Journal: :Nucleic Acids Research 2006
Jinn-Moon Yang Chi-Hua Tung

As more protein structures become available and structural genomics efforts provide structural models in a genome-wide strategy, there is a growing need for fast and accurate methods for discovering homologous proteins and evolutionary classifications of newly determined structures. We have developed 3D-BLAST, in part, to address these issues. 3D-BLAST is as fast as BLAST and calculates the sta...

Journal: :Journal of proteomics 2013
Yasset Perez-Riverol Henning Hermjakob Oliver Kohlbacher Lennart Martens David Creasy Jürgen Cox Felipe Leprevost Baozhen Paul Shan Violeta I Pérez-Nueno Michal Blazejczyk Marco Punta Klemens Vierlinger Pedro A Valiente Kalet Leon Glay Chinea Osmany Guirola Ricardo Bringas Gleysin Cabrera Gerardo Guillen Gabriel Padron Luis Javier Gonzalez Vladimir Besada

The workshop "Bioinformatics for Biotechnology Applications (HavanaBioinfo 2012)", held December 8-11, 2012 in Havana, aimed at exploring new bioinformatics tools and approaches for large-scale proteomics, genomics and chemoinformatics. Major conclusions of the workshop include the following: (i) development of new applications and bioinformatics tools for proteomic repository analysis is cruci...

Journal: :Methods in molecular biology 2006
Gregorio Fernandez-Ballester Luis Serrano

A great challenge in the proteomics and structural genomics era is to predict protein structure and function from sequence, including the identification of biological partners. The development of a procedure to construct position-specific scoring matrices for the prediction and identification of sequences with putative significant affinity faces this challenge. The local and web applications us...

2011
Pooja Mishra Paras Nath Pandey

The number of amino acid sequences is increasing very rapidly in the protein databases like Swiss-Prot, Uniprot, PIR and others, but the structure of only some amino acid sequences are found in the Protein Data Bank. Thus, an important problem in genomics is automatically clustering homologous protein sequences when only sequence information is available. Here, we use graph theoretic techniques...

2005
Setsuko Komatsu

Proteome analysis linked to genome sequence information is very useful for functional genomics. Since proteins are the major players in most processes of living cells, knowledge of the proteome has great relevance to the study of cells and organisms at the molecular level. The technique of proteome analysis using two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) has the power to moni...

پایان نامه :وزارت علوم، تحقیقات و فناوری - دانشگاه الزهراء - دانشکده علوم تربیتی و روانشناسی 1391

abstract: research purpose: the purpose of this research is to identify academic databases assessment factors and criteria at law and political science majors. the necessity of this research is to distinguish academic databases assessment factors and criteria and to identify the most important ones and rank them in order to select an appropriate database according to students’ and faculty memb...

Journal: :Comparative and Functional Genomics 2004
Pierre-Alain Binz Henning Hermjakob Paul van der Vet

We report from the second ESF Programme on Functional Genomics workshop on Data Integration, which covered topics including the status of biological pathways databases in existing consortia; pathways as part of bioinformatics infrastructures; design, creation and formalization of biological pathways databases; generating and supporting pathway data and interoperability of databases with other e...

احمدپور, احسان, اسپوتین, عادل, بازمانی, احد, دریانی, احمد, کاظمی, عبدالحسن,

Genes carry instructions to make protein that affect body's cells and their physical activity. They also play an important role in the occurrence of various characteristics in the body. Recently, scientists in the new field of science known as genomics have studied the genetic instructions. Genomics deals with the discovery of all the sequences in the entire genome of organisms and is used to s...

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