We have used a Mediterranean hot spot of biodiversity (the Island of Sardinia) to investigate the impact of abiotic factors on the distribution of species of the common soil fungus Trichoderma. To this end, we isolated 482 strains of Hypocrea/Trichoderma from 15 soils comprising undisturbed and disturbed environments (forest, shrub lands and undisturbed or extensively grazed grass steppes respe...

We propose a new procedure for clustering nucleotide sequences based on the “Laplacian Eigenmaps” and Gaussian Mixture modelling. This proposal is then applied to a set of 100 DNA sequences from the mitochondrially encoded NADH dehydrogenase 3 (ND3) gene of a collection of Platyhelminthes and Nematoda species. The resulting clusters are then shown to be consistent with the gene phylogenetic tre...

clustering technique is one of the most important techniques of data mining and is the branch of multivariate statistical analysis and a method for grouping similar data in to same clusters. with the databases getting bigger, the researchers try to find efficient and effective clustering methods so that they can make fast and real decisions. thus, in this paper, we proposed an improved ant syst...

Fungi release wide spectrum of volatile organic compounds (VOCs) that belong to several chemical groups with different biochemical origins such as monoterpenes, sesquiterpenes, alcohols, aldehydes, aromatic compounds, esters, furans, ketones, sulfur and nitrogen compounds. Trichoderma species are the most studied fungal biocontrol agents and are successfully used as biofungicides and biofertili...

The classification of bamboos based on floral morphology and reproductive characters is very hard due to erratic flowering behavior and unusually long reproductive cycle. The application of reliable and effective DNA molecular markers is highly essential to address this problem. In the present investigation, inter-simple sequence repeats (ISSR) markers were employed to study phylogenetic relati...

Trichoderma species are known globally mostly for the production of industrially useful enzymes as well as their biocontrol ability against plant pathogens. One of the major strategies of biological control is mycoparasitism against fungal pathogens of crop plants. However, till recently the mechanisms of mycoparasitism by biocontrol potential Trichoderma species at molecular level were not cle...

Despite the huge worldwide diversity of Trichoderma (Hypocreaceae, Ascomycota), only about 22 species have been reported in Korea. Thus, between 2013 and 2015, soil-derived Trichoderma spp. were isolated to reveal the diversity of Korean Trichoderma. Phylogenetic analysis of translation elongation factor 1 alpha gene was used for identification. Among the soil-derived Trichoderma, Trichoderma a...

Although the molecular phylogeny, evolution and biodiversity of arbuscular mycorrhizal fungi (AMF) are becoming clearer, phylotaxonomically reliable sequence data are still limited. To fill this gap, a data set allowing resolution and environmental tracing across all taxonomic levels is provided. Two overlapping nuclear DNA regions, totalling c. 3 kb, were analysed: the small subunit (SSU) rRNA...

trichoderma species are among important antagonists of plant pathogenic fungi. the main purpose of this study was to evaluate the biocontrol potential of native trichoderma spp. isolates from sugar beet fields against phytophthora drechsleri and p. cryptogea, the causal agents of phytophthora root rot of sugar beet. during 2007–08, 85 isolates of trichoderma spp. from sugar beet fields in eight...

Mycoparasitic strains of Trichoderma are applied as commercial biofungicides for control of soilborne plant pathogens. Although the majority of commercial biofungicides are Trichoderma based, chemical pesticides, which are ecological and environmental hazards, still dominate the market. This is because biofungicides are not as effective or consistent as chemical fungicides. Efforts to improve t...