نتایج جستجو برای: linkage analysis

تعداد نتایج: 2857216  

Journal: Iranian Economic Review 2020

I n this study, the Regional Input- Output Structural Decomposition Analysis (I-O SDA) is used to investigate the effects of technological changes on employment in Sistan and Baluchestan Province of Iran during 2006-2011. This paper develops the SDA method to decompose the technological change from two viewpoints of supply and demand for intermediate inputs in each sector. These chan...

Hadi Jazayeri, Masoud Emami, Mohammad Hossein Motazedian,

Dermatophytes are a group of keratinophilic fungi capable of invading keratinized tissues (skin, hair and nails). They cause dermatophytosis (commonly known as tinea or Ring worm) in human and animals. In this report, DNA similarities and genomic linkage of 40 dermatophytes strains was obtained from different universities, were studied by random amplified polymorphic DNA (RAPD–PCR) using 11 ra...

Journal: :BMC Proceedings 2007
Jagadish Rangrej Joseph Beyene Pingzhao Hu Andrew D Paterson

BACKGROUND Many traits differ by age and sex in humans, but genetic analysis of gene expression has typically not included them in the analysis. METHODS We used Genetic Analysis Workshop 15 Problem 1 data to determine whether gene expression in lymphoblasts showed differences by age and/or sex using generalized estimating equations (GEE). We performed quantitative trait linkage analysis of th...

Journal: :American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 2003
Patrick F Sullivan Benjamin M Neale Michael C Neale Edwin van den Oord Kenneth S Kendler

We used simulation to explore the impact of common data imperfections (i.e., missing parents, genotyping error, map error, and missing genotypes) upon the performance of multipoint and single point linkage analysis in the analyses of linkage data from pairs of siblings affected with an idealized complex trait. The performance of single point and multipoint linkage was similar under an unrealist...

Journal: :Animal genetics 1995
M A Groenen B J de Vries J J van der Poel

The European Pig Gene Mapping Project (PiGMaP) and United States Department of Agriculture (USDA) porcine linkage maps for chromosomes 3 and 9 have been aligned by typing three USDA microsatellites from chromosome 3 and five from chromosome 9 on the PiGMaP reference families. Using the CRIMAP linkage analysis package, revised multipoint linkage maps were constructed for chromosome 3 and 9. Incl...

Journal: :Bioinformatics 2005
Emily L. Webb Gabrielle S. Sellick Richard S. Houlston

SUMMARY SNPLINK is a Perl script that performs full genome linkage analysis of high-density single nucleotide polymorphism (SNP) marker sets. The presence of linkage disequilibrium (LD) between closely spaced SNP markers can falsely inflate linkage statistics. SNPLINK removes LD from the marker sets in an automated fashion before carrying out linkage analysis. SNPLINK can compute both parametri...

Journal: :BMC Proceedings 2007
Kristina Allen-Brady Benjamin D Horne Alka Malhotra Craig Teerlink Nicola J Camp Alun Thomas

We performed a multipoint linkage analysis for rheumatoid arthritis (RA) using high-density single-nucleotide polymorphism (SNP) data for chromosome 6 and chromosome 21 using Genetic Analysis Workshop 15 (GAW15) data. These regions were previously shown to have high LOD scores, not accounting for linkage disequilibrium (LD). We propose three novel methods to control for LD in a linkage analysis...

Journal: :Genetics 2009
Huseyin Kucuktas Shaolin Wang Ping Li Chongbo He Peng Xu Zhenxia Sha Hong Liu Yanliang Jiang Puttharat Baoprasertkul Benjaporn Somridhivej Yaping Wang Jason Abernathy Ximing Guo Lei Liu William Muir Zhanjiang Liu

A genetic linkage map of the channel catfish genome (N=29) was constructed using EST-based microsatellite and single nucleotide polymorphism (SNP) markers in an interspecific reference family. A total of 413 microsatellites and 125 SNP markers were polymorphic in the reference family. Linkage analysis using JoinMap 4.0 allowed mapping of 331 markers (259 microsatellites and 72 SNPs) to 29 linka...

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