Intense laser fields, comparable in magnitude with the Coulomb field within atoms and molecules, can be generated by focussing high-energy and ultrashort laser pulses. When exposed to such a strongly perturbing field, molecules exhibit various exotic features that cannot be observed in weak laser fields. We are seeking a deeper understanding of the behavior of molecules in intense laser fields,...

We propose a new method using coarse-graining and molecular dynamics to calculate structural and mechanical properties for sodium silicate glasses at different scales. Using this method we were able to describe the mechanical behavior of the material, this way a new constitutive model was developed which could be used in continuum calculations.

The hydrate/methane gas interface is studied by molecular dynamics simulations. Below the hydrate melting temperature a thin liquid film forms with an associated surface charge density and electrostatic potential. The thickness of the thin liquid film, the charge density, and electrostatic potential at the hydrate/gas interface are established at different subcooling temperatures for the first ...

We present two 2-dimensional approaches to studying the properties of a ball moving down a rough inclined plane (a 3 dimensional system). The rst is a molecular dynamics simulation which has exposed several interesting characteristics of the two dimensional system that are absent in three dimensions. The second is a simpliied stochastic model based on the equations of motion. This model faithfu...

Scorpion venom is a rich source of toxins which have great potential to develop new therapeutic agents. Scorpion chloride channel toxins (ClTxs), such as Chlorotoxin selectively inhibit human Matrix Methaloproteinase-2 (hMMP-2). The inhibitors of hMMP-2 have potential use in cancer therapy. Three new ClTxs, meuCl14, meuCl15 and meuCl16, derived from the venom transcriptome of Iranian scorpion, ...

Scorpion venom is a rich source of toxins which have great potential to develop new therapeutic agents. Scorpion chloride channel toxins (ClTxs), such as Chlorotoxin selectively inhibit human Matrix Methaloproteinase-2 (hMMP-2). The inhibitors of hMMP-2 have potential use in cancer therapy. Three new ClTxs, meuCl14, meuCl15 and meuCl16, derived from the venom transcriptome of Iranian scorpion, ...

This paper investigates the mechanism of water transportation through aquaporin-4(AQP4) of ratbrain cells by means of molecular dynamics simulation with CHARMM software. The AQP4 wasembedded into a bilayer made of Dimystroilphosphatylcholine (DMPC). The results illustrate thatwater molecules move through AQP4's channel with change of orientation of oxygen of eachwater molecule.

The aggregation and solubility of asphaltenes are studied by classical molecular dynamics simulations. Average three-dimensional atomistic models are built on the basis of experimental data for the asphaltenes from a series of crude oil samples. The simulation of two such asphaltene models in four different solvents puts into evidence the formation of oligomeric clusters and gives clues to the ...