This paper presents a novel optical processing approach for exploring genome sequences built upon optical correlator for global alignment and extended DV-curve method for local alignment. To overcome the problem of traditional DV-curve method for presenting an accurate and simplified output, we propose HAWPOD, built upon DVcurve method, to analyze genome sequences in five steps: DNA coding, ali...

In this study, we consider two different inequivalent formulations of the logistic difference equation $x_{n+1}= beta x_n(1- x_n), n=0,1,..., $ where $x_n$ is a sequence of fuzzy numbers and $beta$ is a positive fuzzy number. The major contribution of this paper is to study the existence, uniqueness and global behavior of the solutions for two corresponding equations, using the concept of Huku...

paris polyphylla smith var. yunnanensis (liliaceae) is an important traditional medicinal plant of the yunnan province in china. however, the genomic information regarding this plant is limited. to further understand its molecular background, we conducted illumina hiseq 2000 second-generation sequencing of this plant species. approximately 30,198,679 reads with an average length of 202 bases we...

bioinformatics, through the sequencing of the full genomes for many species, is increasingly relying on efficient global alignment tools exhibiting both high sensitivity and specificity. many computational algorithms have been applied for solving the sequence alignment problem. dynamic programming, statistical methods, approximation and heuristic algorithms are the most common methods applied t...