I present an algorithm to reconstruct direct regulatory interactions in gene networks from the effects of genetic perturbations on gene activity. Genomic technology has made feasible large-scale experiments that perturb the activity of many genes and then assess the effect of each individual perturbation on all other genes in an organism. Current experimental techniques can not distinguish betw...

General relativity successfully describes space-times at scales that we can observe and probe today, but it cannot be complete as a consequence of singularity theorems. For a long time there have been indications that quantum gravity will provide a more complete, non-singular extension which, however, was difficult to verify in the absence of a quantum theory of gravity. By now there are severa...

There are two methods to calculate nucleon decay matrix elements using lattice QCD. One is the direct calculation of the matrix elements dealing with threeand various two-point functions [1,2,3]. The other is the indirect method where one relies on chiral perturbation theory whose low energy constants are calculated on the lattice [4,5,1,2,3]. The former method is preferable but requires huge c...

We develop a systematic chiral perturbation expansion for the calculation of meson-exchange currents in nuclei and apply the formalism to nuclear axial currents. We summarize the principal results of such a calculation to one loop order on nuclear axial-charge transitions which provides a strong support to the conjecture of " chiral filter phenomenon " in nuclear medium. The use of heavy baryon...

Semiconductor nanowires are promising building blocks for next-generation photonics. Indirect proofs of large absorption cross sections have been reported in nanostructures with subwavelength diameters, an effect that is even more prominent in vertically standing nanowires. In this work we provide a three-dimensional map of the light around vertical GaAs nanowires standing on a substrate by usi...

MOTIVATION Targeted interventions in combination with the measurement of secondary effects can be used to computationally reverse engineer features of upstream non-transcriptional signaling cascades. Nested effect models (NEMs) have been introduced as a statistical approach to estimate the upstream signal flow from downstream nested subset structure of perturbation effects. The method was subst...

In this paper, a new analytical approach has been presented for solving strongly nonlinear oscillator problems. Iteration perturbation method leads us to high accurate solution. Two different high nonlinear examples are also presented to show the application and accuracy of the presented method. The results are compared with analytical methods and with the numerical solution using Runge-Kutta m...

This study investigates whether indirect visual evidence of aspiration can influence speech perception as previously found for tactile information. Participants were shown video of a speaker producing the sequence "pom" and "bomb" in a noisy setting. In some tokens, a candle was visibly perturbed by aspiration. All participants were more likely to correctly identify "pom" and incorrectly identi...

in this paper, the homotopy perturbation method (hpm) and elzaki transform is employed to obtain the approximate analytical solution of the sine gorden and the klein gorden equations. the nonlinear terms can be handled by the use of homotopy perturbation method. the proposed homotopy perturbation method is applied to reformulate the first and the second order initial value problems which leads ...